ZHANG Chunbao,QIU Hongmei,ZHAO Hongkun,et al.Genetic Diversity Analysis of Soybean Germplasm in Northeast Region of China by SRAP Markers[J].Soybean Science,2014,33(01):17-22.[doi:10.11861/j.issn.1000-9841.2014.01.0017]
东北地区大豆种质遗传多样性的SRAP标记分析
- Title:
- Genetic Diversity Analysis of Soybean Germplasm in Northeast Region of China by SRAP Markers
- 文章编号:
- 10009841(2014)01001706
- 分类号:
- S565.1
- 文献标志码:
- A
- 摘要:
- 利用12对SRAP引物对东北地区20份大豆材料进行了遗传多样性分析。结果表明:12对引物组合共扩增出1 527条多态性条带,各材料之间的遗传相似系数为0.286 9~0.598 0,平均相似系数为0.444 3,显示了东北大豆种质丰富的遗传多样性。经UPGMA聚类分析,在阈值0.46处,可将供试材料分为6大类群,其中黑、吉两省大豆材料及国外种质间遗传相似度较高。研究表明,遗传改良和定向选择造成大豆品种间遗传背景日趋狭窄和混乱,SRAP分子标记技术能有效地分析大豆材料的遗传多样性和亲缘关系。
- Abstract:
- To study the genetic diversity of soybean germplasm in northeast region of China,12 pairs of SRAP primers were used to screen the genetic diversity of 20 soybean lines,and a total of 1 527 SRAP polymorphic bands were detected.The genetic similarity coefficient among the tested cultivars ranged from 0.286 9 to 0.598 0,averaging 0.444 3.It shows genetic diversity among soybean germplasm.The tested cultivars were divided into six groups based on the UPGMA cluster analysis.It indicates that there are highly genetic similarity among soybean germplasm in Heilongjiang,Jilin provinces and foreign region.It shows that genetic improvement and directional selection causes narrowness and confusion in the genetic backgrounds of soybean.However,SRAP maker can be applied to study the genetic diversity of soybean effectively.
参考文献/References:
[1] 高运来,姚丙晨,刘春燕,等.黑龙江省主栽大豆品种遗传多样性的SSR分析[J].植物学报,2009,44(5):556-561.(Gao Y L,Yao B C,Liu C Y,et al.Genetic diversity analysis by simple sequence repeats of soybean( Glycine max )varieties from Heilongjiang[J].Chinese Bulletin Botany,2009,44:556-561.)
[2] Li G,Quiros C F.Sequencerelated amplified polymorphism(SRAP) ,a new marker system based on a simple PCR reaction:its application to mapping and gene tagging in Brassica [J]. Theoretical and Applied Genetics,2001,103:455-461.
[3] 姜树坤,马慧,刘君,等.利用SRAP标记分析玉米遗传多样性[J].分子植物育种,2007,5(3):412-416.(Jiang S K,Ma H,Liu J,et al.Genetic diversity in maize inbred lines revealed by SRAPs marker[J].Molecular Plant Breeding,2007,5(3):412-416.)
[4] 张安世,徐九文,辛长永,等.河南省水稻中晚粳新品系遗传多样性的SRAP分析[J].中国农学通报,2010,26(2):50-54.(Zhang A S,Xu J W,Xin C Y,et al.Analysis of genetic diversity of new middlelate lines of Japonica rice in Henan province by SRAP[J].Chinese Agricultural Science Bulletin,2010,26(2):50-54.)
[5] 王茂芊,白晨.华北地区甜菜品系遗传多样性的SRAP分析[J].内蒙古农业科技,2010(2):29-32.(Wang M Q,Bai C.SRAP marker of sugar beet in North China[J].Inner Mongolia Agricultural Science & Technology,2010(2):29-32.)
[6] 李博,王茂芊,王华忠.SRAP对东北区骨干甜菜单胚品系的遗传多样性分析[J].中国糖料,2012(2):11-14.(Li B,Wang M Q,Wang H Z.Genetic diversity analysis of sugarbeet monogerm genotypes in the northeast region by SRAP molecule marker[J].Sugar Crops of China,2012(2):11-14.)
[7] Budak H,Shearman R C,Parmaksiz I,et al.Molecular characterization of buffalograss germplasm using sequencerelated amplified polymorphism markers[J].Theoretical and Applied Genetics,2004,108:328-334.
[8] 白坚,胡旭,周淑婷,等.47个建兰品种的SRAP遗传多样性分析[J].植物遗传资源学报,2012,13(3):376-380.(Bai J,Hu X,Zhou S T,et al.Genetic diversity of 47 Cymbidium ensifolium varieties assessed by SRAP markers[J].Journal of Plant Genetic Resources,2012,13(3):376-380.)
[9] 彭邵峰,张党权,陈永忠,等.14个油茶良种遗传多样性的SRAP分析[J].中南林业科技大学学报,2011,31(1):80-85.(Peng S F,Zhang D Q,Chen Y Z,et al.Genetic diversity analysis of elite cultivars of Camellia oleifera by SRAP[J].Journal of Central South University of Forestry & Technology,2011,31(1):80-85.)
[10]陈罡,邢兆凯,潘文利,等.辽宁地区主栽杨树品种的SRAP标记遗传多样性分析[J].东北林业大学学报,2010,38(10):19-22.(Chen G,Xing Z K,Pan W L,et al.Genetic diversities of Populus in Liaoning area by using SRAP markers[J].Journal of Northeast Forestry University,2010,38(10):19-22.)
[11]Youssef M,James A C,RiveraMadrid R,et al.Musa genetic diversity revealed by SRAP and AFLP[J]. Molecular Biotechnology,2011,47(3):18999.
[12]任良真,张春宝,赵洪锟,等.一种改良的快速高质大豆基因组DNA提取方法[J].中国农学通报,2012,28(9):3841.(Ren L Z,Zhang C B,Zhao H K,et al.An improved method to rapid and highquality of genomic DNA extraction from soybean[J].Chinese Agricultural Science Bulletin,2012,28(9):3841.)
[13]周春娥,王芳,周延清,等.大豆遗传多样性的SRAP分析[J].江苏农业科学,2012,40(1):40-42.(Zhou C E,Wang F,Zhou Y Q,et al.Genetic diversity analysis of soybean by SRAP markers[J].Jiangsu Agricultural Sciences,2012,40(1):40-42.)
[14]Baloch F S,Kurt C,Arioglu H,et al.Assaying of diversity among soybean( Glycin max L.Merr.)and peanut( Arachis hypogaea L.)genotypes at DNA level[J].Turkish Journal of Agriculture and Forestry,2010,34:285-301.
[15]付亚书.绥农大豆品种系谱分析及主要性状比较研究[D].北京:中国农业科学院,2006.(Fu Y S.Analysis of pedigree and comparative of major traits for Suinong soybean cultivar[D].Beijing:Chinese Academy of Agricultural Sciences,2006.)
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备注/Memo
基金项目: 国家高技术研究发展计划“863计划”(2012AA101106,2011AA10A105);国家自然科学基金(31300282,31000141);吉林省科技发展计划项目(20130102050JC)。
第一作者简介: 张春宝(1980),男,博士,副研究员,主要从事大豆遗传育种研究。Email:cbzhang@126.com。
通讯作者: 董英山(1963),男,博士,研究员,主要从事大豆遗传资源研究。Email:ysdong@cjaas.com。