GAO Xiao-ling,WU Hui,CHEN Qi,et al.Study on Genetic Diversity of Huang-Huai-Hai and Southern Soybean Cultivars by SCoT Markers[J].Soybean Science,2016,35(05):717-722.[doi:10.11861/j.issn.1000-9841.2016.05.0717]
黄淮海和南方大豆育成品种的目标起始密码子(SCoT)遗传多样性分析
- Title:
- Study on Genetic Diversity of Huang-Huai-Hai and Southern Soybean Cultivars by SCoT Markers
- Keywords:
- Soybeans; Released cultivar; SCoT markers; Genetic diversity
- 文献标志码:
- A
- 摘要:
- 利用目标起始密码子(SCoT)标记对159份1923-2005年育成的中国黄淮海和南方大豆育成品种进行遗传多样性分析。从80条目标起始密码子(SCoT)标记引物中筛选出27条引物,27条引物共扩增出130条DNA条带,其中多态性条带110条,多态性比率为84.62%。Nei′s 基因多样性变化范围为0.24~0.49,平均为0.37;平均多态信息含量(PIC)为0.27。黄淮海大豆育成品种的Nei’s基因多样性指数和Shannon信息指数的平均值和变幅范围略高于南方品种,黄淮海大豆育成品种平均值多态信息含量(PIC)也略高于南方品种,但变幅范围略低于南方品种。基于SCoT 标记遗传距离的聚类分析表明:I类群中99个主要是黄淮海大豆育成品种,Ⅱ类群中60个主要是南方大豆育成品种。随着时间的推移,大豆育成品种的遗传多样性呈递增趋势,至1971-1990年达到最高并保持不变,表明自70年代以来大豆育成品种遗传基础有所拓宽。结果表明SCoT可用于大豆育成品种遗传多样性研究,为拓宽大豆育成品种遗传基础提供重要参考。
- Abstract:
- In this research, SCoT markers were applied to detect the genetic diversity among 159 cultivated soybeans released during 1923-2005 in China from Huang-Huai-Hai and southern region.Twenty seven primers were selected from 80 SCoT primers, 130 DNA bands were produced by 27 primers including 110 polymorphic bands,with an average of 84.62%.Nei′s range of gene diversity ranged from 0.24 to 0.49, and the average was 0.37. The average value of locus polymorphism information contents 0.27. Dendrograms generated from coefficient of genetic distance between species on the basis of SCoT markers showed that 99 cultivated soybeans were mainly from Huang-Huai-Hai in Cluster I, 60 cultivated soybeans of Group II were mainly from Nanfang. From 1923, the genetic diversity of cultivated soybean accessions is increasing, reached the highest in 1971-1990 and unchanged in the next two periods. This showed that the genetic diversity of cultivated soybean increased from 1970s.The results indicated that SCoT markers were feasible and effective to analyze the genetic diversity of cultivated soybean and provided an important reference for broadening the genetic base of soybean cultivars
参考文献/References:
[1]Cho M J, Widholm J M, Vodkin L O.Cassettes for seed specific expression tested in transformed embryo genic cultures of soybean[J].Plant Molecular Biology Report, 1995, 13(3): 255-269.
相似文献/References:
[1]刘章雄,李卫东,孙石,等.1983~2010年北京大豆育成品种的亲本地理来源及其遗传贡献[J].大豆科学,2013,32(01):1.[doi:10.3969/j.issn.1000-9841.2013.01.002]
LIU Zhang-xiong,LI Wei-dong,SUN Shi,et al.Geographical Sources of Germplasm and Their Nuclear Contribution to Soybean Cultivars Released during 1983 to 2010 in Beijing[J].Soybean Science,2013,32(05):1.[doi:10.3969/j.issn.1000-9841.2013.01.002]
[2]李彩云,余永亮,杨红旗,等.大豆脂质转运蛋白基因GmLTP3的特征分析[J].大豆科学,2013,32(01):8.[doi:10.3969/j.issn.1000-9841.2013.01.003]
LI Cai-yun,YU Yong-liang,YANG Hong-qi,et al.Characteristics of a Lipid-transfer Protein Gene GmLTP3 in Glycine max[J].Soybean Science,2013,32(05):8.[doi:10.3969/j.issn.1000-9841.2013.01.003]
[3]王明霞,崔晓霞,薛晨晨,等.大豆耐盐基因GmHAL3a的克隆及RNAi载体的构建[J].大豆科学,2013,32(01):12.[doi:10.3969/j.issn.1000-9841.2013.01.004]
WANG Ming-xia,CUI Xiao-xia,XUE Chen-chen,et al.Cloning of Halotolerance 3 Gene and Construction of Its RNAi Vector in Soybean (Glycine max)[J].Soybean Science,2013,32(05):12.[doi:10.3969/j.issn.1000-9841.2013.01.004]
[4]张春宝,李玉秋,彭宝,等.线粒体ISSR与SCAR标记鉴定大豆细胞质雄性不育系与保持系[J].大豆科学,2013,32(01):19.[doi:10.3969/j.issn.1000-9841.2013.01.005]
ZHANG Chun-bao,LI Yu-qiu,PENG Bao,et al.Identification of Soybean Cytoplasmic Male Sterile Line and Maintainer Line with Mitochondrial ISSR and SCAR Markers[J].Soybean Science,2013,32(05):19.[doi:10.3969/j.issn.1000-9841.2013.01.005]
[5]卢清瑶,赵琳,李冬梅,等.RAV基因对拟南芥和大豆不定芽再生的影响[J].大豆科学,2013,32(01):23.[doi:10.3969/j.issn.1000-9841.2013.01.006]
LU Qing-yao,ZHAO Lin,LI Dong-mei,et al.Effects of RAV gene on Shoot Regeneration of Arabidopsis and Soybean[J].Soybean Science,2013,32(05):23.[doi:10.3969/j.issn.1000-9841.2013.01.006]
[6]杜景红,刘丽君.大豆fad3c基因沉默载体的构建[J].大豆科学,2013,32(01):28.[doi:10.3969/j.issn.1000-9841.2013.01.007]
DU Jing-hong,LIU Li-jun.Construction of fad3c Gene Silencing Vector in Soybean[J].Soybean Science,2013,32(05):28.[doi:10.3969/j.issn.1000-9841.2013.01.007]
[7]张力伟,樊颖伦,牛腾飞,等.大豆“冀黄13”突变体筛选及突变体库的建立[J].大豆科学,2013,32(01):33.[doi:10.3969/j.issn.1000-9841.2013.01.008]
ZHANG Li-wei,FAN Ying-lun,NIU Teng-fei?,et al.Screening of Mutants and Construction of Mutant Population for Soybean Cultivar "Jihuang13”[J].Soybean Science,2013,32(05):33.[doi:10.3969/j.issn.1000-9841.2013.01.008]
[8]盖江南,张彬彬,吴瑶,等.大豆不定胚悬浮培养基因型筛选及基因枪遗传转化的研究[J].大豆科学,2013,32(01):38.[doi:10.3969/j.issn.1000-9841.2013.01.009]
GAI Jiang-nan,ZHANG Bin-bin,WU Yao,et al.Screening of Soybean Genotypes Suitable for Suspension Culture with Adventitious Embryos and Genetic Transformation by Particle Bombardment[J].Soybean Science,2013,32(05):38.[doi:10.3969/j.issn.1000-9841.2013.01.009]
[9]王鹏飞,刘丽君,唐晓飞,等.适于体细胞胚发生的大豆基因型筛选[J].大豆科学,2013,32(01):43.[doi:10.3969/j.issn.1000-9841.2013.01.010]
WANG Peng-fei,LIU Li-jun,TANG Xiao-fei,et al.Screening of Soybean Genotypes Suitable for Somatic Embryogenesis[J].Soybean Science,2013,32(05):43.[doi:10.3969/j.issn.1000-9841.2013.01.010]
[10]刘德兴,年海,杨存义,等.耐酸铝大豆品种资源的筛选与鉴定[J].大豆科学,2013,32(01):46.[doi:10.3969/j.issn.1000-9841.2013.01.011]
LIU De-xing,NIAN Hai,YANG Cun-yi,et al.Screening and Identifying Soybean Germplasm Tolerant to Acid Aluminum[J].Soybean Science,2013,32(05):46.[doi:10.3969/j.issn.1000-9841.2013.01.011]
[11]孙慧敏,赵团结,盖钧镒.亚洲地区大豆育成品种幼苗期耐淹性鉴定和优选[J].大豆科学,2010,29(01):1.[doi:10.11861/j.issn.1000-9841.2010.01.0001]
SUN Hui-min,ZHAO Tuan-jie,GAI Jun-yi.Evaluation and Identification of Elite Germplasm with Submergence Tolerance at Seedling Stage of Soybean Cultivars Released in Asia[J].Soybean Science,2010,29(05):1.[doi:10.11861/j.issn.1000-9841.2010.01.0001]
[12]熊冬金,赵团结,盖钧镒.1923~2005年中国大豆育成品种的核心祖先亲本分析[J].大豆科学,2007,26(05):641.[doi:10.3969/j.issn.1000-9841.2007.05.001]
XIONG Dong-jin,ZHAO Tuan-jie,GAI Jun-yi.THE CORE ANCESTORS OF SOYBEAN CULTIVARS RELEASED DURING 1923-2005 IN CHINA[J].Soybean Science,2007,26(05):641.[doi:10.3969/j.issn.1000-9841.2007.05.001]
[13]王凤敏,赵双进,王静华,等.河北省不同时期育成大豆品种产量构成因子分析[J].大豆科学,2014,33(06):830.[doi:10.11861/j.issn.1000-9841.2014.06.0830]
WANG Feng-min,ZHAO Shuang-jin,WANG Jing-hua,et al.Analysis on the Yield Components of Soybean Cultivars Released in Different Stages of Hebei Province[J].Soybean Science,2014,33(05):830.[doi:10.11861/j.issn.1000-9841.2014.06.0830]
[14]王彩洁,李伟,张礼凤,等.黄淮海地区近20年来育成大豆品种亲本分析[J].大豆科学,2018,37(04):503.[doi:10.11861/j.issn.1000-9841.2018.04.0503]
WANG Cai-jie,LI Wei,ZHANG Li-feng,et al.Parental Analysis of Soybean Cultivars Released in Yellow-Huai-Hai Rivers Valley from 1996 to 2016[J].Soybean Science,2018,37(05):503.[doi:10.11861/j.issn.1000-9841.2018.04.0503]
[15]刘嘉霖,陈琪,谢慧敏,等.黄淮海和南方大豆育成品种TRAP标记的遗传结构研究[J].大豆科学,2020,39(03):341.[doi:10.11861/j.issn.1000-9841.2020.03.0341]
LIU Jia-lin,CHEN Qi,XIE Hui-min,et al.Genetic Structure and Diversity of Soybean Cultivars Released from Huang-Huai-Hai and Southern China Based on TRAP Marker[J].Soybean Science,2020,39(05):341.[doi:10.11861/j.issn.1000-9841.2020.03.0341]
备注/Memo
基金项目:国家自然科学基金(31260332,30871550)。第一作者简介:高晓玲(1991-),女,硕士,主要从事大豆种质资源研究。E-mail:gaoxiaoling2046@163.com。通讯作者:熊冬金(1962-),男,博士,副教授,主要从事大豆种质资源研究。E-mail:jxxdj@163.com。