WEI Lai,KOU Kun,TANG Xiao-fei,et al.Evaluation of Genetic Diversity of Soybean Introductions and Chinese Accessions Using SSR Markers[J].Soybean Science,2011,30(02):184-189,193.[doi:10.11861/j.issn.1000-9841.2011.02.0184]
中国与引进国外大豆种质资源遗传多样性分析
- Title:
- Evaluation of Genetic Diversity of Soybean Introductions and Chinese Accessions Using SSR Markers
- 文章编号:
- 1000-9841(2011)02-0184-06
- Keywords:
- Soybean; Diversity; Allelic variation
- 分类号:
- S565.1
- 文献标志码:
- A
- 摘要:
- 利用11对SSR引物分析了来自中国、加拿大、美国、俄罗斯和意大利的共166份栽培大豆种质资源,共检测到33个等位变异,平均每对引物检测到的等位变异数为3.09,遗传多样性指数为0.946。中国栽培大豆种质具有较丰富的遗传多样性,聚类分析结果表明中国和俄罗斯大豆相似系数较大,初步认定中俄大豆的亲缘关系较近。加拿大和意大利的材料相似系数较高,推测两国间某些材料有相似的遗传背景。中国与美国大豆品种间遗传差异较大,可以进行种质资源的交换利用。
- Abstract:
- For extending soybean genetic basis and overcoming the narrow genetic basis of choosing parents when creating a new cross combination, we used PCR technique to find the allelic variation among soybean germplasm resources of different countries. SSR(Simple Sequences Repeats) variation was assessed in 166 sample of soybean from China, Canada, United States, Russia and Italy with 11paired-primers. In total we found 33 locus, averaging 3.09 per locus, and the average polymorphism information content (PIC) was 0.946. We believed that Chinese soybean had more polymorphism than other countries, and China and Russia have adjacent relationship. The samples from Canada and Italy had high similarity coefficient, so we supposed that they could have similar genetic background. The samples from China and that from United States had a huge differences in genetic diversity.
参考文献/References:
[1]关荣霞, 常汝镇, 邱丽娟. 用于SSR 分析的大豆DNA 的快速提取[J]. 大豆科学, 2003, 21(1): 73-74. (Guan R X, Chang R Z, Qiu L J. Rapid isolation of soybean DNA for SSR analysis[J]. Soybean Science, 2003, 21(1): 73-74.) [2]黎裕, 贾继增, 王天宇. 分子标记的种类及其发展[J]. 生物技术通报,1999(4): 19-22. (Li Y, Jia J Z, Wang T Y. Types of molecular markers and their development[J]. Biotechnology Information, 1999(4): 19-22.) [3]邱丽娟, 常汝镇. 中国大豆品系的系谱分析[C]. 第五届世界大豆科学讨论会论文集, 1994: 84.(Qiu L J, Chang R Z. Pedigree analysis of soybean lines in China[C]. Papers Symposium of Fifth World Soybean Science, 1994: 84. ) [4]李维民, 吴为人, 卢浩然. 检测作物数量性状基因与遗传标记连锁关系的方差分析法及其应用[J]. 作物学报, 1993,19(2):97-102. (Li W M, Wu W R, Lu H R. Detection of crop genetic markers and quantitative trait loci linkage analysis of variance and its application[J]. Acta Agronomica Sinica, 1993,19(2):97-102. ) [5]关荣霞. 大豆重要农艺性状的QTL定位及中国大豆与日本大豆的遗传多样性分析[R]. 中国农业科学院博士后研究工作报告, 2004:43-63.( (Guan R X. QTL mapping of soybean agronomie charaeters and genetic diversity analysis of soybean cultivars from China and Japan[R]. Chinese Academy of Agriculture Sciences Post Doctoral Working Report, 2004:43-63.) [6]胡志昂, 王洪新. 遗传多样性研究的原则和方法[M]. 北京:中国科技出版社, 1994:118-122. (Hu Z A, Wang H X. Principles and methodologies of genetic diversity studies[M]. Beijing: China Science and Technology Press, 1994:118-122.) [7]贾晓艳, 张彩英. 河北省大豆推广品种遗传多样性分析[J]. 植物遗传资源学报, 2006, 7(3): 310-315. (Jia X Y, Zhang C Y. A study on genetic diversity of soybean cultivars in Hebei[J]. Journal of Plant Genetic Resources, 2006, 7(3): 310-315.) [8]吴晓雷, 贺超英, 陈受宜,等. 用SSR分子标记研究大豆属种间亲缘进化关系[J]. 遗传学报, 2001,28(4): 359-366.(Wu X L, He C Y, Chen S Y, et al. Phylogenetic Analysis of interspecies in Genus Glycine?through SSR marker[J]. Acta Genetics Sinica, 2001, 28 (4) : 359-366). [9]张博, 邱丽娟, 常汝镇. 中国大豆部分获奖品种与其祖先亲本间SSR标记的多态性比较和遗传关系分析[J]. 农业生物技术学报, 2003,11(4): 351-358. (Zhang B, Qiu L J, Chang R Z. Diversity comparison and genetic relationship analysis between awarded soybean cultivars and their ancestors in China[J]. Journal of Agricultural Biotechnology, 2003, 11(4): 351-358.) [10]周晓馥, 庄炳昌, 王玉民,等. 利用RAPD与SSR技术进行野生大豆种群内分化的研究[J]. 中国生态农业学报, 2002,10(4): 6-9. (Zhou X F, Zhuang B C, Wang Y M,et al.Population differentiation of wild soybean based on the RAPD and SSR analysis[J]. Chinese Journal of Eco-Agriculture, 2002,10(4): 6-9.) [11]Barnham K D, Fcmcis D M, Dorrance A E, et al. Genetic diversity pattems among phytophthora resistant soybean plant introdnctions based on SSR markers[J].Crop Science,2002,42(2):338-343. [12]Silva D C G, Yamanaka N, Brogin R L,et al.Molecular maping of two loci that confer resistance to Asian rust in soybean[J].Theoretical and Applied Genetics, 2008,117:57-63. [13]Rogers S O, Bendich A J.Extraction of DNA from plant, fungal and algal tissues[M]//Gelvin S B, Schilperoort R A. Plant Molecular Biology Manual. Boston, MA: Kluwer Academic Publishers, 1994, D1: 1-8. [14]刘峰,东方阳,邹继军,等. 应用微卫星标记进行大豆种质多样性和遗传变异性分析[J]. 遗传学报, 2000,27(7):628-633.( Liu F, Dong F Y, Zou J J, et al. Soybean germplasm diversity and genetic variance detected by microsatellite markers[J]. Acta Genetica Sinica, 2000, 27(7):628-633.) [15]Rongwen J, Akkaya M S, Lavi U, et al. The use of microsatellite DNA markers for soybean genotype identification[J]. Theoretical and Applied Genetics,1995, 19:43-48. [16]Narvel J M, Chu W C, Fehr W R, et al. Development of multiplex sets of SSR marlers covering the soybean genome[J]. Journal of Molecular Breeding, 2000, 6:175-183.
相似文献/References:
[1]刘章雄,李卫东,孙石,等.1983~2010年北京大豆育成品种的亲本地理来源及其遗传贡献[J].大豆科学,2013,32(01):1.[doi:10.3969/j.issn.1000-9841.2013.01.002]
LIU Zhang-xiong,LI Wei-dong,SUN Shi,et al.Geographical Sources of Germplasm and Their Nuclear Contribution to Soybean Cultivars Released during 1983 to 2010 in Beijing[J].Soybean Science,2013,32(02):1.[doi:10.3969/j.issn.1000-9841.2013.01.002]
[2]李彩云,余永亮,杨红旗,等.大豆脂质转运蛋白基因GmLTP3的特征分析[J].大豆科学,2013,32(01):8.[doi:10.3969/j.issn.1000-9841.2013.01.003]
LI Cai-yun,YU Yong-liang,YANG Hong-qi,et al.Characteristics of a Lipid-transfer Protein Gene GmLTP3 in Glycine max[J].Soybean Science,2013,32(02):8.[doi:10.3969/j.issn.1000-9841.2013.01.003]
[3]王明霞,崔晓霞,薛晨晨,等.大豆耐盐基因GmHAL3a的克隆及RNAi载体的构建[J].大豆科学,2013,32(01):12.[doi:10.3969/j.issn.1000-9841.2013.01.004]
WANG Ming-xia,CUI Xiao-xia,XUE Chen-chen,et al.Cloning of Halotolerance 3 Gene and Construction of Its RNAi Vector in Soybean (Glycine max)[J].Soybean Science,2013,32(02):12.[doi:10.3969/j.issn.1000-9841.2013.01.004]
[4]张春宝,李玉秋,彭宝,等.线粒体ISSR与SCAR标记鉴定大豆细胞质雄性不育系与保持系[J].大豆科学,2013,32(01):19.[doi:10.3969/j.issn.1000-9841.2013.01.005]
ZHANG Chun-bao,LI Yu-qiu,PENG Bao,et al.Identification of Soybean Cytoplasmic Male Sterile Line and Maintainer Line with Mitochondrial ISSR and SCAR Markers[J].Soybean Science,2013,32(02):19.[doi:10.3969/j.issn.1000-9841.2013.01.005]
[5]卢清瑶,赵琳,李冬梅,等.RAV基因对拟南芥和大豆不定芽再生的影响[J].大豆科学,2013,32(01):23.[doi:10.3969/j.issn.1000-9841.2013.01.006]
LU Qing-yao,ZHAO Lin,LI Dong-mei,et al.Effects of RAV gene on Shoot Regeneration of Arabidopsis and Soybean[J].Soybean Science,2013,32(02):23.[doi:10.3969/j.issn.1000-9841.2013.01.006]
[6]杜景红,刘丽君.大豆fad3c基因沉默载体的构建[J].大豆科学,2013,32(01):28.[doi:10.3969/j.issn.1000-9841.2013.01.007]
DU Jing-hong,LIU Li-jun.Construction of fad3c Gene Silencing Vector in Soybean[J].Soybean Science,2013,32(02):28.[doi:10.3969/j.issn.1000-9841.2013.01.007]
[7]张力伟,樊颖伦,牛腾飞,等.大豆“冀黄13”突变体筛选及突变体库的建立[J].大豆科学,2013,32(01):33.[doi:10.3969/j.issn.1000-9841.2013.01.008]
ZHANG Li-wei,FAN Ying-lun,NIU Teng-fei?,et al.Screening of Mutants and Construction of Mutant Population for Soybean Cultivar "Jihuang13”[J].Soybean Science,2013,32(02):33.[doi:10.3969/j.issn.1000-9841.2013.01.008]
[8]盖江南,张彬彬,吴瑶,等.大豆不定胚悬浮培养基因型筛选及基因枪遗传转化的研究[J].大豆科学,2013,32(01):38.[doi:10.3969/j.issn.1000-9841.2013.01.009]
GAI Jiang-nan,ZHANG Bin-bin,WU Yao,et al.Screening of Soybean Genotypes Suitable for Suspension Culture with Adventitious Embryos and Genetic Transformation by Particle Bombardment[J].Soybean Science,2013,32(02):38.[doi:10.3969/j.issn.1000-9841.2013.01.009]
[9]王鹏飞,刘丽君,唐晓飞,等.适于体细胞胚发生的大豆基因型筛选[J].大豆科学,2013,32(01):43.[doi:10.3969/j.issn.1000-9841.2013.01.010]
WANG Peng-fei,LIU Li-jun,TANG Xiao-fei,et al.Screening of Soybean Genotypes Suitable for Somatic Embryogenesis[J].Soybean Science,2013,32(02):43.[doi:10.3969/j.issn.1000-9841.2013.01.010]
[10]刘德兴,年海,杨存义,等.耐酸铝大豆品种资源的筛选与鉴定[J].大豆科学,2013,32(01):46.[doi:10.3969/j.issn.1000-9841.2013.01.011]
LIU De-xing,NIAN Hai,YANG Cun-yi,et al.Screening and Identifying Soybean Germplasm Tolerant to Acid Aluminum[J].Soybean Science,2013,32(02):46.[doi:10.3969/j.issn.1000-9841.2013.01.011]
[11]王瑞珍,赵朝森,程春明,等.南方大豆核心种质主要农艺及产量性状的表型多样性评价[J].大豆科学,2010,29(04):580.[doi:10.11861/j.issn.1000-9841.2010.04.0580]
WANG Rui-zhen,ZHAO Chao-sen,CHENG Chun-ming,et al.Evaluation on Main Agronomic and Yield Characters of Soybean Core Collections in Southern China[J].Soybean Science,2010,29(02):580.[doi:10.11861/j.issn.1000-9841.2010.04.0580]
[12]李瑾,蔡柏岩,刘潇睿,等.硫素对大豆根围AM真菌菌群结构的影响[J].大豆科学,2010,29(06):990.[doi:10.11861/j.issn.1000-9841.2010.06.0990]
LI Jin,CAI Bai-yan,?LIU Xiao-rui,et al.Effect of Sulfur on Microbial Structure of AM Fungi in Soybean Rhizosphere[J].Soybean Science,2010,29(02):990.[doi:10.11861/j.issn.1000-9841.2010.06.0990]
[13]谢甫绨,Takahata Yoshihito,Ohno Yasuo.利用ISSR标记进行菜用大豆和普通大豆的分类[J].大豆科学,2008,27(05):732.[doi:10.11861/j.issn.1000-9841.2008.05.0732]
XIE Fu-ti,Takahata Yoshihito,Ohno Yasuo.Phylogenetic Analysis of Vegetable-type (Edamame) and Grain-type Soybean[Glycine max(L.) Merr.]Cultivars Through ISSR Markers[J].Soybean Science,2008,27(02):732.[doi:10.11861/j.issn.1000-9841.2008.05.0732]
[14]苗以农 石连旋 刘立侠 朱长甫 许守民.大豆形态结构和生理生化性状的多样性[J].大豆科学,2004,23(02):130.[doi:10.11861/j.issn.1000-9841.2004.02.0130]
Miao Yinong Shi Lianxuan Liu Lixia Zhu Changfu Xu Shoumin.THE DIVERSITY OF MORPHOLOGICAL AND PHYSIOLOGICAL TRAITS OF SOYBEAN[J].Soybean Science,2004,23(02):130.[doi:10.11861/j.issn.1000-9841.2004.02.0130]
[15]刘明骞,张新鑫,马佳慧,等.不同改良处理对梅州离子型稀土矿废弃地大豆根瘤菌多样性的影响[J].大豆科学,2019,38(01):77.[doi:10.11861/j.issn.1000-9841.2019.01.0077]
LIU Ming-qian,ZHANG Xin-xin,MA Jia-hui,et al.The Effect of Different Restorative Treatments on the Diversity of Soybean Rhizobia in the Abandoned Land of Ionic Rare Earth Mine[J].Soybean Science,2019,38(02):77.[doi:10.11861/j.issn.1000-9841.2019.01.0077]
备注/Memo
基金项目:国家高技术研究发展计划(863计划)重点资助项目(20065AA102F9);大豆产业技术体系资助项目; 引进国际先进农业科学技术计划(948计划)资助项目(2006-G5)。