CAI Wei,JIN Jing,SHEN Jian-guo,et al.Detection of Bean Pod Mottle Virus by TaqMan-MGB Real-time IC/TC-RT-PCR[J].Soybean Science,2016,35(03):489-493.[doi:10.11861/j.issn.1000-9841.2016.03.0489]
TaqMan-MGB 荧光定量IC /TC-RT-PCR 检测菜豆荚斑驳病毒
- Title:
- Detection of Bean Pod Mottle Virus by TaqMan-MGB Real-time IC/TC-RT-PCR
- Keywords:
- TaqMan-MGB real-time IC-RT-PCR; TaqMan-MGB real-time TC-RT-PCR; Bean pod mottle virus ( BPMV) ; Detection
- 分类号:
- S565. 1
- 文献标志码:
- A
- 摘要:
- 菜豆荚斑驳病毒( Bean pod mottle virus,BPMV) 是我国重要的检疫性有害生物,BPMV 传入的风险随大豆进境数量增多而加大。本文针对菜豆荚斑驳病毒,以大豆种子提取液为材料,分别建立了TaqMan-MGB 荧光定量IC-RTPCR和TaqMan-MGB 荧光定量TC-RT-PCR 快速检测方法。根据GenBank 公布的BPMV 外壳蛋白基因序列,选择其保守区域,设计1 对特异性引物和1 条TaqMan-MGB 探针,测定了TaqMan-MGB 荧光定量IC-RT-PCR 和TaqMan-MGB 荧光定量TC-RT-PCR 方法的特异性和灵敏度,并将TaqMan-MGB 荧光定量IC-RT-PCR、TaqMan-MGB 荧光定量TC-RTPCR、IC-RT-PCR 和TC-RT-PCR 4 种检测方法的灵敏度进行比较。结果表明: 所建立的两种检测方法特异性良好; TCRT-PCR 的灵敏度为10 - 1 倍病毒提取液原液; IC-RT-PCR 和TaqMan-MGB 荧光定量TC-RT-PCR 灵敏度相当,为10 - 3倍病毒提取液原液; TaqMan-MGB 荧光定量IC-RT-PCR 灵敏度最高,为10 - 5 倍病毒提取液原液,是IC-RT-PCR 和Taq-Man-MGB 荧光定量TC-RT-PCR 检测方法的102 倍,是TC-RT-PCR 检测方法的104 倍; 两种检测方法均能较好应用于实际大豆样品的检测。本文所建立的TaqMan-MGB 荧光定量IC/TC-RT-PCR 检测方法利用抗原特异性或试管非特异性捕捉病毒粒子,无需提取RNA,为进境大豆种子上BPMV 的检测提供了稳定、快速、简便的技术依据,其较高的灵敏度和特异性具有较好的应用价值。
- Abstract:
- Bean pod mottle virus( BPMV) is regarded as an important quarantine plant pathogen in our country,the risk ofBPMV spread from outside increases under the huge soybean import. TaqMan-MGB real-time IC-RT-PCR and TaqMan-MGBreal-time TC-RT-PCR methods were developed to detect BPMV by using soybean seed extracts as materials. Based on the conservedregion of coat protein sequences of BPMV in GenBank,primers and TaqMan-MGB probe were designed. The specificityand sensitivity of these two methods were measured and the comparation of sensitivity of TaqMan-MGB real-time IC-RT-PCR,TaqMan-MGB real-time TC-RT-PCR,IC-RT-PCR and TC-RT-PCR were operated. Two established methods had a high specificity,the comparison results indicated that TC-RT-PCR shared 10 - 1 crude extracts,IC-RT-PCR and TaqMan-MGB real-timeTC-RT-PCR possessed the same sensitivity reaching 10 - 3 crude extracts while TaqMan-MGB real-time IC-RT-PCR had thehighest sensitivity about 10 - 5 crude extracts. The sensitivity of TaqMan-MGB real-time IC-RT-PCR was 102 times more thanTC-RT-PCR,104 times more than TC-RT-PCR. It was practical to use the two established methods in sample detection. Sothe established TaqMan-MGB real-time IC/TC-RT-PCR method could meet the need of detection with specific capture of antibodyor nonspecific capture of tube to catch virion and no need to isdate RNA. It provides the basic approach to detect BPMVin imported soybean seeds with required specificity and sensitivity characteristics.
参考文献/References:
[1] Michelutti R,Tu J C,Hunt D W A,et al. First report of Beanpod mottle virus in soybean in Canada[J]. Plant Disease,2002,86( 3) : 330-330.
备注/Memo
基金项目: 福州市科技计划项目( 2013-N-54 ) ; 福建出入境检验检疫局科技项目( FK2011-07 ) ; 福建省杰出青年科学基金资助项目( 2014J06008) ; 质检公益性行业科研专项项目( 201410076) 。