LIU Yong-xin,HAN Ying-peng,CHANG Wei,et al.A RT-PCR Method Suitable for MicroRNA Identification of Soybean[J].Soybean Science,2009,28(04):600-604.[doi:10.11861/j.issn.1000-9841.2009.04.0600]
一种适合大豆MicroRNA鉴定的RT-PCR方法
- Title:
- A RT-PCR Method Suitable for MicroRNA Identification of Soybean
- 文章编号:
- 1000-9841(2009)04-0600-05
- Keywords:
- Soybean; MicroRNA; RT-PCR; Identification
- 分类号:
- S565.1
- 文献标志码:
- A
- 摘要:
- MicroRNAs(miRNAs)是一类调控真核基因转录后表达的非编码小分子RNA。绝大多数miRNAs由计算机预测得到,其存在与否及时空分布还不清楚。因此建立高效、敏感和特异的检测方法,是探明miRNAs在多种组织中时空调控的基础和前提。研究以Lau等和Shi等的方法为基础设计方案,采用通用反转录引物,以大豆幼叶、老叶、根、茎组织为研究材料,对预测的、且Sanger Institute公布的miR156a进行扩增以检测扩增效率和准确性。经比较,该方法具有反转录引物通用、成本低,操作简单,可快速、敏感、高通量地同时比较一种组织中多个miRNAs,也可比较多个组织中miRNA;且该方法比Northern Blot和Microarray需要的RNA量少得多。
- Abstract:
- The microRNAs (miRNAs) are a newly identified class of small non-coding RNA,which regulate post-transcriptional gene expressing in eukaryote.Most miRNAs are predicted through the computer,the presentence/absence and the spatial/temporal of miRNAs still unclear.It is important for the establishment of efficient,sensitive and specific detection methods to detect miRNAs in different organism or period.In this study,the protocol derived from Lau et al.and Shi et al.was used to detect miR156a,predicted and released by Sanger Institute,in old or young leaf,root,and shoot for verifying this method.By comparison,this method is low cost,simple,fast,and sensitive,common for primer of RT-PCR,which could identify a number of miRNAs in the same organism and compare miRNAs from different organism.Furthermore,this method need less RNA,in comparison with Northern Blot and Microarray.
参考文献/References:
[1]ShaoYao Ying.Micro RNA protocols[M].Totowa,New Jersey:Humana Press,2006.
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备注/Memo
基金项目:国家高技术研究发展计划(863计划)目标导向资助项目(2006AA10ZF1Z1);国家高技术研究发展计划(863计划)重点资助项目(2006AA100104-4)。?