ZHONG Xiao-fang,LIU Xiao-dong,YANG Xiang-dong,et al.Target Genes Selection of RNAi in the Resistance to Plant-parasitic Nematodes[J].Soybean Science,2014,33(04):599-602.[doi:10.11861/j.issn.1000-9841.2014.04.0599]
RNAi在植物寄生线虫抗性研究中靶基因的选择策略
- Title:
- Target Genes Selection of RNAi in the Resistance to Plant-parasitic Nematodes
- Keywords:
- RNAi; Plant-parasitic nematode; Parastism; mRNA metabolism
- 分类号:
- S565.1
- 文献标志码:
- A
- 摘要:
- RNA干扰(RNA interference,RNAi)是一种由dsRNA起始的转录后基因沉默机制。近年来,RNAi技术在植物抗线虫研究方面得到广泛的应用。随着线虫基因组测序工作的不断推进,越来越多的线虫基因被开发继而当作RNA干扰的靶基因,其中以寄生线虫的生长发育或寄生过程建立等所必需的基因作为RNAi的目的基因是防治线虫的新方法,也是培育抗性品种的新选择。文章介绍了在RNAi研究中,所选择的植物寄生线虫基因的种类及其研究进展。
- Abstract:
- RNAi(RNA interference)is a post-transcriptional gene silencing mechanism which is initiated by dsRNA.Recently,RNAi is widely applied in plant-parasitic nematode resistance.With the proceeding of nematode genome sequencing,more and more genes are explored as target genes for RNAi to improve the resistance to plant-parasitic nematodes.Among those genes,parasitism,development and mRNA metabolism related genes are suitable choices for RNAi and it is an alternative approach to engineer resistance to nematode.In this review,the selected genes and research progress are introduced.
参考文献/References:
[1]Bernstein E,Caudy A A,Hammond S M,et al.Role for a bidentate ribonuclease in the initiation step of RNA interference[J].Nature?2001,409:363-366. [2] Guo S,Kemphues K.Par-1,a gene required for establishing polarity in?C.elegansembroys,encodes a putative Ser/Thr kinse that is asymmetrically distributed[J].Cell,1995,81:611-620. [3] Fire A,Xu S,Montgomery M K,et al.Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans[J].Nature,1998,391:806-811. [4] Kawasaki H,Taira K.Short hairpin type of dsRNA that are controlled by tRNA(Val)promoter significantly induce RNAi mediated gene silencing in the cytoplasm of human cells[J].Nucleic Acids Research,2003,31:7002-7007. [5] 石智,符立梧.RNAi及其在肿瘤研究中的应用[J].生物化学与生物物理展,2004,31:492-499.(Shi Z,Fu L W.RNAi and its application in tumor study[J].Progress in Biochemistry and Biophysics,2004,31:492-499.) [6] Caplen N J,Fleenor J,Fire A,et al.dsRNA-mediated gene silencing in cultured Drosophilacells[J].Gene,2000,252:95-105. [7] Palauqui J C,Elmayan T,Pollien J M,et al.Systemic acquired silencing:transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions[J].EMBO Journal,1997,16:4738-4745. [8] Zamore P D,Tuschi T,Sharp P A,et al.RNAi:dsRNA directs the ATP dependent cleavage of mRNA at 21 to 23 nucleotide intervals[J].Cell,1999,101:25-33. [9] Jones L,Ratcliff F,Baulcombe D C.RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1for maintenance[J].Current Biology,2001,11:747-757. [10]Winston W M,Molodowtich C,Hunter C P.Systemic RNAi in C.elegansrequires the putative transmembrane protein SID-1[J].Science,2002,295:2459-2459. [11]Timmons L,Fire A.Specific interference by ingested dsRNA[J].Nature,1998,395:854. [12]Timmons L,Court D L.Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans[J].Gene,2001,263:103-112. [13]Mello C C,Conte D J.Revealing the world of RNA interference[J].Nature,2004,431:338-342. [14]Sindhu A S,Maier T R,Mitchum M G,et al.Effective and specific in planta RNAi in cyst nematodes:expression interference of four parasitism genes reduces parasitic success[J].Journal of Experimental Botany,2009,60:315-324. [15]Rosso M N,Jones J T,Abad P.RNAi and functional genomics in plant parasitic nematodes[J].Annual Review of Phytopathology,2009,47:207-232. [16]Pramod P K,Heinz R,Yeckel G,et al.A virus-induced gene silencing method to study soybean cyst nematode parasitism in Glycine ma[J].BMC Research Notes,2013,6:255. [17]Dinh P T,Knoblaucn M,Elling A A.Non-destructive imaging of plant-parasitic nematode development and host response to nematode pathogenesis[J].Phytopathology,2014,104:497-506. [18]Li J R,Todd T,Lee J,et al.Biotechnological application of functional genomics towards plant-parasitic nematode control[J].Plant Biotechnology Journal,2011,9:936-944. [19]Xue B,Hamamouch N,Li C,et al.The 8D05 parasitism gene of Meloidogyne incognita is required for successful infection of host roots[J].Phytopathology,2013,103:175-181. [20]Bakhetia M,Charlton W,Atkinson H J,et al.RNA interference of dual oxidase in the plant nematode Meloidogyne incognita[J].Molecular Plant-Microbe Interactactions,2005,18:1099-1106. [21]Chen Q,Reham S,Smant G,et al.Functional analysis of pathogenicity proteins of the potato cyst nematode Globodera rostochiensisusing RNAi[J].Molecular Plant-Microbe Interactactions,2005,18:621-625. [22]Bakhetia M,Urwin P,Atkinson H J.qPCR analysis and RNAi define pharyngeal gland cell expressed genes of?Heterodera glycinesrequired for initial interactions with the host[J].Molecular Plant-Microbe Interactions,2007,20:306-312. [23]Hu L,Cui R,Sun L,et al.Molecular and biochemical characterization of the β-1,4-endoglucanase gene Mj-eng-3 in the root-knot nematode Meloidogyne javanica[J].Experimental Parasitology,2013,135:15-23. [24]Shingles J,Lilley C,Atkinson H J,et al.Meloidogyne incognita:molecular and biochemical characterization of a cathepsin L cysteine proteinase and the effect on parasitism following RNAi[J].Experimental Parasitology,2007,115:114-120. [25]Huang G,Allen R,Davis E L,et al.Enginering broad root-knot resistance intransgenic plants by RNAi silencing of a conserved and essential root-knot nematode parasitism gene[J].Proceedings of the National Academy of Sciences of the USA,2006,103:14302-14306. [26]Ibrahim H M,Alkharouf N W,Meyer S L,et al.Post-transcriptional gene silencing of root-knot nematode in transformed soybean roots[J].Experimental Parasitology,2011,127:90-99. [27]Dubreuil G,Magliano M,Deleury E,et al.Transcriptome analysis of root-knot nematode functions induced in the early stages of parasitism[J].New Phytologist,2007,176:426-436. [28]Urwin P E,Lilley C J,Atkinson H J.Ingestion of double stranded RNA by pre-parasitic juvenile cyst nematodes leads to RNA interference[J].Molecular Plant-Microbe Interactions,2002,5:747-752. [29]Abad P,Gouzy J,Aury J,et al.Plant parasitism in metazoans:insights from the Meloidogyne incognitanematode genome[J].Nature Biotechnology,2008,26:909-915. [30]Alkharouf N W,Klink V P,Matthews B F.Identification of Heterodera glycines(soybean cyst nematode[SCN])cDNA sequences with high identity to those of?Caenorhabditis eleganshaving lethal mutant or RNAi phenotypes[J].Experimental Parasitology,2007,115:247-258.
相似文献/References:
[1]杜景红,刘丽君.大豆fad3c基因沉默载体的构建[J].大豆科学,2013,32(01):28.[doi:10.3969/j.issn.1000-9841.2013.01.007]
DU Jing-hong,LIU Li-jun.Construction of fad3c Gene Silencing Vector in Soybean[J].Soybean Science,2013,32(04):28.[doi:10.3969/j.issn.1000-9841.2013.01.007]
[2]高 乐,宋英培,李 凯,等.大豆花叶病毒HC-Pro基因保守序列克隆及其RNAi载体的构建[J].大豆科学,2013,32(06):744.[doi:10.11861/j.issn.1000-9841.2013.06.0744]
[3]杨 巧,刘 倩,简 恒.RNAi技术在抗大豆胞囊线虫基因工程研究中的应用[J].大豆科学,2013,32(04):548.[doi:10.11861/j.issn.1000-9841.2013.04.0548]
YANG Qiao,LIU Qian,JIAN Heng.Technology of RNAi and Its Application in Genetic Engineering against Soybean Cyst Nematode of Soybean[J].Soybean Science,2013,32(04):548.[doi:10.11861/j.issn.1000-9841.2013.04.0548]
[4]王宗尧,吴页宝,欧阳享泱,等.RNAi技术在大豆中的应用及展望[J].大豆科学,2013,32(04):561.[doi:10.11861/j.issn.1000-9841.2013.04.0561]
WANG Zong-yao,WU Ye-bao,OUYANG Xiang-yang,et al.Progress on Application of RNA Interference in Soybean[J].Soybean Science,2013,32(04):561.[doi:10.11861/j.issn.1000-9841.2013.04.0561]
[5]王志坤,李文滨,刘珊珊.RNA干扰技术及在植物抗病研究中的应用[J].大豆科学,2008,27(03):521.[doi:10.11861/j.issn.1000-9841.2008.03.0521]
WANG Zhi-kun,LI Wen-bin,LIU Shan-shan.Technology of RNAi and Its Application in Disease Resistance of Plant[J].Soybean Science,2008,27(04):521.[doi:10.11861/j.issn.1000-9841.2008.03.0521]
[6]廖文林,栾鹤翔,高乐,等.大豆翻译延伸因子GmEF1A干扰载体的构建及大豆遗传转化[J].大豆科学,2016,35(06):902.[doi:10.11861/j.issn.1000-9841.2016.06.0902]
LIAO Wen-lin,LUAN He-xiang,GAO Le,et al.Interference Vector Construction of Soybean Translation Elongation Factor GmeEF1A and Soybean Transformation[J].Soybean Science,2016,35(04):902.[doi:10.11861/j.issn.1000-9841.2016.06.0902]
备注/Memo
基金项目:国家自然科学基金(31000141);中国博士后基金(2013M531004);吉林省博士后基金;吉林省农业学院博士后基金。