|Table of Contents|

Bioinformatics Analysis of ST1 Gene in Soybean(PDF)

《大豆科学》[ISSN:1000-9841/CN:23-1227/S]

Issue:
2016年03期
Page:
394-401
Research Field:
Publishing date:

Info

Title:
Bioinformatics Analysis of ST1 Gene in Soybean
Author(s):
JING YanSUN JingGAO Sai-nanZHAO XueTENG Wei-liHAN Ying-pengLI Wen-bin
Key Laboratory of Soybean Biology in Chinese Ministry of Education /Key Laboratory of Soybean Biology and Breeding ( Genetics) of Chinese AgricultureMinistry,Agronomy College of Northeast Agricultural University,Harbin 150030,China
Keywords:
Soybean GmST1 SULT Protein structure analysis Functional prediction
PACS:
S565. 1
DOI:
10.11861/j.issn.1000-9841.2016.03.0394
Abstract:
Sulfotransferase( SULT) is a gene superfamily. In this study,we mainly analyzed the structure and function of ST1gene in soybean based on bioinformatics. The results showed that the full sequence length of GmST1( Williams 82) was 1 439bp. The CDS was 1 035 bp in length, encoding 344 amino acids. By sequence alignment, one non-synonymous SNP was foundbetween Williams 82 and Dongnong 93-046, leading to the changes of amino acid. There were multiple cis-elements about lightresponses,SA,drought and auxin in promoter sequence region detected by PlantCARE. The Bio-Analytic Resource for PlantBiology database was used to analyze the different expression of the homologous gene of GmST1 in Arabidopsis. The results indicatedthat the gene had tissue-special expression and was involved in salt,drought and diseases responses.

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Last Update: 2016-06-28