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Whole Genome Identification of Soybean MYB Transcription Factors and Bioinformatics Analysis(PDF)

《大豆科学》[ISSN:1000-9841/CN:23-1227/S]

Issue:
2016年01期
Page:
52-57
Research Field:
Publishing date:

Info

Title:
Whole Genome Identification of Soybean MYB Transcription Factors and Bioinformatics Analysis
Author(s):
CHENG Shu-fei DUANMU Hui-zi CHEN Chao LIU Ai-lin XIAO Jia-lei ZHU Yan-ming
Soybean; MYB; Transcription factors; Bioinformatics
Keywords:
Soybean MYB Transcription factors Bioinformatics
PACS:
-
DOI:
10.11861/j.issn.1000-9841.2016.01.0052
Abstract:
Key Laboratory of Agricultural Biological Functional Genes, Northeast Agricultural University, Harbin 150030, ChinaAbstract: MYB transcription factor family is one of the largest families of transcription factors in plants.Recent research indicated MYB transcription factors participate in variety kinds of biological processes. MYB transcription factors have a unique DNA-binding domain in their N terminal, which can combine with DNA molecules and regulate the expression of downstream genes.In this study we conducted a genome-wide analysis to identify, classified 304 MYB transcription factors of soybean and analyzed their conserved domain.These MYB genes were classified into 22 subgroups by phylogenetic analysis. Chromosomal location analysis was conducted. Further analysis showed that part of the MYB genes among different chromosomal showed highly similarity. Transcriptome analysis of the MYB genes showed that most of them could response to salinity-alkalinity stress.

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Last Update: 2016-01-28