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Validation of Selected gma-miR1508a Targets and Construction of Its Plant Expression Vectors(PDF)

《大豆科学》[ISSN:1000-9841/CN:23-1227/S]

Issue:
2015年06期
Page:
1090-1092
Research Field:
Publishing date:

Info

Title:
Validation of Selected gma-miR1508a Targets and Construction of Its Plant Expression Vectors
Author(s):
NI Zhi-yong YU Yue-hua REN Yan-ping CHEN Quan-jia QU Yan-ying
College of Agronomy, Xinjiang Agricultural University/ Key Laboratory of Agricultural Biological Technology, Xinjiang Agricultural University, Urumqi 830052, China
Keywords:
Soybean gma-miR1508a Target gene Plant expression vector
PACS:
-
DOI:
10.11861/j.issn.1000-9841.2015.06.1090
Abstract:
MicroRNAs (miRNAs) are endogenous, noncoding, small RNAs that have essential regulatory functions in plant growth, development, and stress response processes.In this study, one target gene of gma-miR1508a, Glyma16g27800, was verified using a modified 5′ RLM-RACE (RNA ligasemediated rapid amplification of 5′ cDNA ends) assay. To generate an overexpression construct that constitutively overexpressed gma-miR1508a under the control of a cauliflower mosaic virus 35S promoter, a 101 bp fragment flanking the miRNA sequence including the fold-back structure was amplified from soybean genomic DNA by PCR. The amplified fragment was subcloned into the pCAMBIA3301 vector. PCR and sequencing results suggest that plant expression vector of gma-miR1508a gene was constructed successfully.This constructed vectors provided an effective too1 for the further study of gma-miR1508a gene function.

References:

[1]Jones-Rhoades M W, Bartel D P, Bartel B. MicroRNAs and their regulatory roles in plants[J]. Annual Review of Plant Biology, 2006,57:19-53

[2]Chuck G, Candela H, Hake S. Big impacts by small RNAs in plant development[J].Current Opinion in Plant Biology, 2009,12 (1): 81-86
[3]Liu Q, Chen Y Q. Insights into the mechanism of plant development: Interactions of miRNAs pathway with phytohormone response[J]. Biochemical and Biophysical Research Communications, 2009,384 (1):1-5
[4]Chen J, Li W X, Xie D, et al. Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microrna in host gene expression[J]. The Plant Cell, 2004,16 (5):1302-1313
[5]Sunkar R, Kapoor A, Zhu J K. Posttranscriptional induction of two Cu/Zn superoxide dismutase genes in Arabidopsis is mediated by down regulation of miR398 and important for oxidative stress tolerance[J]. The Plant Cell, 2006,18 (8):2051-2065
[6]Ni Z Y, Hu Z, Jiang Q Y, et al. Overexpression of gma-MIR394a confers tolerance to drought in transgenic Arabidopsis thaliana[J]. Biochemical and Biophysical Research Communications, 2012, 427(2), 330-335[7]陈锐.耐旱野生大豆MicroRNA的鉴定与表达分析[D].北京:中国农业科学院,2009:86-87. (Chen R. Identification and expression analysis of microRNAs in drought-resistant wild soybean (Glycine soja)[D].Beijing: Chinese Academy of Agricultural Sciences, 2009:86-87.)
[8]罗中钦.大豆逆境胁迫相关microRNA的发掘与验证[D].北京:中国农业科学院,2012:28-29.(Luo Z Q. Identification and validation of soybean microRNAs involved in stress responses[D].Beijing: Chinese Academy of Agricultural Sciences, 2012:28-29.)
[9]李永光,艾佳,王涛,等. 大豆gma-miR1508a靶基因预测及功能分析[J].大豆科学,2014,33(4):479-482(Li Y G, Ai J, Wang T, et al.The target genes prediction and analysis of gma-miR1508a[J]. Soybean Science, 2014, 33(4): 479-482.)
[10]German M A, Pillay M, Jeong D H, et al. Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends[J]. Nature Biotechnology, 2008, 26 (8): 941-946
[11]German M A, Luo S, Schroth G, et al. Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome[J]. Nature Protocols, 2009, 4 (3): 356-362
[12]Hu Z, Jiang Q Y, Ni Z Y, et al. Analyses of a Glycine max degradome library identify microRNA targets and microRNAs that trigger secondary siRNA biogenesis[J]. Journal of Integrative Plant Biology, 2013, 55 (2): 160-176
[13]Llave C, Xie Z, Kasschau K D, et al.Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA[J].Science, 2002, 297: 2053-2056
[14]Ni Z Y, Hu Z, Jiang Q Y, et al.GmNFYA3, a target gene of miR169, is a positive regulator of plant tolerance to drought stress[J]. Plant Molecular Biology, 2013, 82,(1-2):113-129
[15]Mallory A C, Bartel D P, Bartel B. MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR 17 is essential for proper development and modulates expression of early auxin response genes[J]. The Plant Cell, 2005, 17 (5): 1360-1375
[16]Zhao T, Li G L, Mi S J, et al.A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii[J].Genes & Development, 2007, 21:1190-1203.

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Last Update: 2016-01-07