|Table of Contents|

Hitchhiking Effect and Responses Analysis about 100-Seed Weight of Wild Soybean Chromosome Segment Substitution Lines(PDF)

《大豆科学》[ISSN:1000-9841/CN:23-1227/S]

Issue:
2015年06期
Page:
950-956
Research Field:
Publishing date:

Info

Title:
Hitchhiking Effect and Responses Analysis about 100-Seed Weight of Wild Soybean Chromosome Segment Substitution Lines
Author(s):
WANG Jiu-zhen1;  WANG Dan-hua1;  MA Zhan-zhou1; GU Yue1; ZENG Qing-li1;  LIU Chun-yan2;  JIANG Hong-wei2;  CHEN Qing-shan1
1. Agronomy College, Northeast Agricultural University, Harbin 150030, China;?
2.The Crop Research and Breeding Center of Land-Reclamation of Heilongjiang Province, Harbin 150090, China
Keywords:
Soybean;  Chromosome segment substitution lines;  Hitchhiking effect;  Responses analysis
PACS:
-
DOI:
10.11861/j.issn.1000-9841.2015.06.0950
Abstract:
The hitchhiking effects in the advanced wild soybean chromosome segment substitution lines with selection under 100-seed weight conditions were analyzed by scanning multiple molecular loci.The lociare connected with 100-seed weight and their response in selection condition were analysized.28.10% of the loci in random population were detected with segregation distortion（P＜0.05）, after selection in view of 100-seed weight, the segregation distortion of allelic genes was reduced but the degree of segregation distortion increased.The segregation distortion ratio reduced to 4.13% and 23.14%, the variation of chi-square reduced to 0-166.67 and 0.01-81.30. Twelve putative 100-seed weight related loci were obtained using chi-square test (P＜0.05) by comparison of the introgressive frequency of alleles between random population and selected population.

References:

［1］游光霞, 张学勇. 基于选择牵连效应的标记/性状关联分析方法简介［J］. 遗传, 2007, 29(7):881-888.(You G X, Zhang X Y.Identification of important genes by marker-trait association analysis based on hitchhiking mapping［J］. Hereditas, 2007, 29(7):881-888.)

［2］Lyttle T W.Segregation distorters［J］.Annual Review Genetics, 1991, 25:511-557．
［3］安梅, 杨德龙, 栗孟飞, 等. 小麦RIL群体第一部分同源群染色体遗传多样性与偏分离分析［J］.华北农学报, 2012, 27(4):73-79.(An M, Yang D L, Li M F, et al. Segregation distortion and genetic diversity in homoeologous group 1 of wheat RIL population［J］. Acta Agriculturae Boreali-Sinica, 2012, 27(4):73-79
［4］彭勇, 梁永书, 王世全, 等.水稻SSR标记在RI群体的偏分离分析［J］. 分子植物育种, 2006, 4(6): 786-790.(Peng Y, Liang Y S, Wang S Q, et al.Analysis of segregation distortion of ssr markers in the RI population of rice［J］. Molecular Plant Breeding, 2006, 4(6): 786-790.)
［5］陈庆全, 张玉山. 籼型水稻SSR标记遗传连锁图谱的构建及偏分离分析［J］. 分子植物育种, 2009, 7(4):685-689.(Chen Q Q, Zhang Y S. Distorted segregation and construction of molecular linkage map of SSR markers in indica rice［J］. Molecular Plant Breeding, 2009, 7(4): 685-689.)
［6］张向阳, 张红宇, 徐培洲, 等. 水稻SSR及Indel分子标记在籼粳交F2群体的偏分离分析［J］. 中国稻米, 2014, 20(5): 13-17. (Zhang X Y, Zhang H Y, Xu P Z, et al. Distorted segregation of SSR and Indel makers in the F2?population by Indica cross Japonica［J］. China Rice, 2014, 20(5): 13-17.)
［7］严建兵, 汤华, 黄益勤, 等.玉米F2群体分子标记偏分离的遗传分析［J］. 遗传学报, 2003, 30(10): 913-918.(Yan J B, Tang H, Huang Y Q, et al. Genetic analysis of segregation distortion of molecular markers in maize F2?population［J］. Acta Genetica Sinica, 2003, 30(10): 913-918.)
［8］Zhang F, Wan X Q, Pan G T. Genetic analysis of segregation distortion of molecular markers in maize F2 population［J］. Acta Agronomica Sinica, 2006, 132(19):1391-1396
［9］陈志伟, 张文龙, 杨文鹏, 等. 玉米双交F1群体中SSR遗传标记位点的遗传分离分析［J］.种子, 2008, 27(5): 20-25.(Chen Z W, Zhang W L, Yang W P, et al.Segregation of genotypes at SSR loci among double 2 cross F1?population in maize［J］. Seed, 2008, 27(5): 20-25.)
［10］帅琴, 罗义维, 卢承琼,等.桑树SV分子标记的开发及在F1群体的偏分离分析［J］.蚕业科学, 2014, 40(3):374-381.(Shuai Q, Luo Y W, Lu C Q, et al.The development of structure variation marker in mulberry and the segregation distortion analysis in F1?population［J］. Science of Sericulture, 2014, 40(3): 374-381.)
［11］王宇, 李莉, 张守都, 等. 海湾扇贝杂交、近交和自交家系的微卫星标记偏分离分析［J］. 海洋科学, 2012, 36(8):109-115. (Wang Y, Li L, Zhang S D, et al.Distorted segregation of microsatellite markers in hybridization, inbreeding, and inbred lines of bay scallops［J］. Marine Sciences, 2012, 36(8):109-115.)
［12］Lukens L, Doebley J.Molecular evolution of the teosinte branched gene among maize and related grasses［J］.Molecular Biology and Evolution, 2001,18: 627-638.
［13］陈佳慧, 兰进好, 王晖, 等.小麦RIL群体SSR分子标记偏分离的遗传分析［J］. 麦类作物学报, 2011, 31(3): 407-410. (Chen J H, Lan J H, Wang H, et al.Genetic analysis on segregation distortion of molecular markers in wheat RIL population［J］. Journal of Triticeae Crops, 2011, 31(3):407-410.)
［14］王慧兰, 刘红侠, 王娜, 等.SNP和SSR标记在小麦Heyne×Lakin重组自交系群体中的偏分离分析［J］.麦类作物学报, 2014, 34(9):1205-1209.(Wang H L, Liu H X, Wang N, et al. Genetic analysis of segregation distorion of SNP and SSR markers in wheat RIL population from the cross Heyne×Lakin［J］.Journal of Triticeae Crops, 2014, 34(9): 1205-1209.)
［15］毛彦芝, 蒋洪蔚, 刘春燕,等. 用高世代回交群体定位大豆荚粒性状的QTL及上位性分析［J］.大豆科学, 2014, 33(4):467-472. (Mao Y Z, Jiang H W, Liu C Y, et al. QTL mapping and epistasis analysis of pods per plant and seeds per plant with an advanced backcross population［J］. Soybean Science, 2014, 33(4):467-472.)
［16］刘峰, 吴晓雷, 陈受宜.大豆分子标记在RIL群体中的偏分离分析［J］. 遗传学报, 2000, 27(10):883-887. (Liu F, Wu X L, Chen S Y. Analysis of segregation distortion of molecular markers in the RIL population of soybean［J］. Acta Genetica Sinica, 2000, 27(10):883-887.)
［17］邱鹏程, 张闻博, 刘春燕, 等. 大豆回交群体耐旱耐盐的选择牵连效应及响应分析［J］. 中国油料作物学报, 2011, 33(5): 444-450.(Qiu P C, Zhang W B, Liu C Y, et al. Hitchhiking effect and responses analysis about drought tolerance and salt tolerance of the backcrossing introgression lines in soybean［J］. Chinese Journal of Oil Crop Sciences, 2011, 33(5): 444-450.)
［18］邱丽娟.大豆种质资源描述规范和数据标准［M］. 北京: 中国农业出版社, 2006. (Qiu L J. Descriptors and date standard for soybean(Glycine max L Merr)［M］. Beijing:Chinese Agricultural Press,2006.)
［19］Doyle J J. Isolation of plant DNA from fresh tissue［J］.Focus, 1990, 12: 13-15.
［20］王永军, 吴晓雷, 喻德跃, 等. 重组自交系群体的检测调整方法及其在大豆NJRIKY群体的应用［J］. 作物学报, 2004, 30(5): 413-418. (Wang Y J, Wu X L, Yu D Y, et al. Method of evaluation and adjustment of recombinant inbred line population and its application to the soybean ril population NJRIKY［J］.Acta Agronomica Sinica, 2004, 30(5): 413-418.)
［21］Jannink J, Walsh J B. Association mapping in plants［C］. 2005: 59-68.
［22］张学勇, 童依平, 游光, 等.选择牵连效应分析:发掘重要基因的新思路［J］.中国农业科学, 2006, 39(8): 1526-1535. (Zhang X Y, Tong Y P, You G, et al. Hitchhiking effect mapping: A new approach for discovering agronomic important genes［J］. Scientia Agricultura Sinica, 2006, 39(8): 1526-1535.)
［23］彭勇, 梁永书, 王世全, 等.水稻SSR标记在RI群体的偏分离分析［J］.分子植物育种, 2006, 4(6): 786-790. (Peng Y, Liang Y S, Wang S Q, et al. Analysis of segregation distortion of ssr markers in the RI population of rice［J］.Molecular Plant Breeding, 2006, 4(6): 786-790.)
［24］汪骞, 和江明, 林良斌, 等.大白菜回交导入系群体构建及其遗传分析［J］ 园艺学报, 2009, 36 (9): 1305-1310. (Wang Q, He J M, Lin L B, et al. The development of backcross introgression lines(BILs) and genetic analysis for brassica campestris［J］. Acta Horticulturae Sinica, 2009, 36 (9): 1305-1310.)
［25］张德水,陈受宜,惠东威,等.栽培大豆与半野生大豆杂种F2群体中RFLP标记的偏分离及其形成原因的分析［J］. 遗传学报, 1997, 24(4):362-367.(Zhang D S, Chen S Y, Hui D W, et al.Analysis the reason of segregation distortion of RFLP markers in the F2?population crossed by cultivated soybean and semi-wild soybean［J］. Acta Genetica Sinica, 1997, 24(4):362-367.)
［26］Xu Y, Zhu L, Xiao J, et al. Chromosomal regions associated with segregation distortion of molecular markers in F2 backcross, doubled haploid, and recombinant inbred populations in rice (Oryza sativa L)［J］.Molecular Biology and Evolution, 1997, 253:535-545.
［27］王晓武, 娄平, 何杭军, 等.利用芥蓝×青花菜DH群体构建AFLP连锁图谱［J］.园艺学报, 2005, 32(1):30-34.(Wang X W, Lou P, He H J, et al.Construction of an aflp-based genetic linkage map using a doubled-haploid(DH) population derived from a cross between Chinese Kala and Broccoli［J］. Acta Horticulturae Sinica, 2005, 32(1):30-34.)
［28］Li W, Lin Z X, Zhang X L. A novel segregation distortion in intraspecific population of Asian cotton(Gossypium arboretum L) detected by molecular markers［J］.Journal of Genetics and Genomics, 2007, 34(7):634-640.
［29］曾庆力, 蒋洪蔚, 刘春燕, 等.利用高世代回交群体对大豆小粒性状的基因型分析及QTL定位［J］.中国油料作物学报, 2012, 34(5):473-477. (Zeng Q L, Jiang H W, Liu C Y, et al. Genotype analysis and QTL mapping small seed size soybean with advanced backcross population［J］. Chinese Journal of Oil Crop Sciences, 2012, 34(5):473-477.)
［30］陈庆山, 蒋洪蔚, 孙殿军, 等.利用野生大豆染色体片段代换系定位百粒重QTL［J］.大豆科学, 2014, 33(2):154-160. (Chen Q S, Jiang H W, Sun D J, et al. QTL mapping for 100-seed weight using wild soybean chromosome segment substitution lines［J］. Soybean Science, 2014, 33(2):154-160.)

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Last Update: 2015-12-31